If you mean being available NOWHERE ELSE but GitHub, then F-Droid is correct, because GitHub is private availability, not public availability.
People are obsessed with lies and decentralization right now, so it's hard to get through life without humoring people who would call GitHub source code "publicly available" (and using their wording), but it's not actual truth.
Either way, your app made it through in the past
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Tor is hosted in many places, including inside the Tor network itself with onion addresses. But that is irrelevant for fdroid policies.
Our app was there before, but since we added Tor, they removed it. I am not going to remove one of our most important privacy features just to please arbitrary rules of a centralized app store.